我创建了一个提供下载按钮的闪亮应用程序 . 按下时,将以html格式创建降价报告 . 这是应用程序:
server <- function(input, output) {
output$report <- downloadHandler(
filename = "report.html",
content = function(file){
tempReport <- file.path(tempdir(), "report.Rmd")
file.copy("report.Rmd", tempReport, overwrite = TRUE)
out <- rmarkdown::render(tempReport, output_file = file)
}
)
}
ui <- fluidPage(
downloadButton("report", label=NULL)
)
shinyApp(ui = ui, server = server)
report.Rmd看起来像这样:
---
output: html_document
---
## Hello
```{r map}
leaflet::leaflet()
如果我从rstudio-server运行应用程序,evrything工作正常:创建并下载一个独立的html文件 . 它包括传单 Map .
但是,如果我从shiny-server运行它,我得到的是以下错误:
```java
processing file: report.Rmd
output file: report.knit.md
pandoc: Could not find data file /usr/lib64/R/library/leaflet/htmlwidgets/lib/leaflet/
Warnung: Error in : pandoc document conversion failed with error 97
Stack trace (innermost first):
53: pandoc_convert
52: convert
51: rmarkdown::render
50: download$func [/srv/shiny-server/biserver/downReport/app.R#7]
1: runApp
Error : An error has occurred. Check your logs or contact the app author for clarification.
该错误似乎是通过结合rmarkdown,闪亮服务器和传单来触发的 . 例如,从报告中删除传单会修复它 .
任何帮助都是非常有用的 .
这是sessionInfo()的输出:
R version 3.3.3 (2017-03-06)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
locale:
[1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C
LC_TIME=de_DE.UTF-8 LC_COLLATE=de_DE.UTF-8
[5] LC_MONETARY=de_DE.UTF-8 LC_MESSAGES=de_DE.UTF-8
LC_PAPER=de_DE.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] shiny_1.0.3
loaded via a namespace (and not attached):
[1] Rcpp_0.12.10 digest_0.6.12 rprojroot_1.2 mime_0.5
R6_2.2.1 xtable_1.8-2 jsonlite_1.4
[8] backports_1.0.5 magrittr_1.5 evaluate_0.10 stringi_1.1.5
leaflet_1.1.0 rmarkdown_1.5 tools_3.3.3
[15] stringr_1.2.0 htmlwidgets_0.8 crosstalk_1.0.0 yaml_2.1.14
httpuv_1.3.3 htmltools_0.3.6 knitr_1.15.1
我正在使用Shiny Server v1.5.3.838(Node.js v6.10.0) . 这是我的shiny-server.conf:
run_as shiny;
# Define a server that listens of port 3839.
server {
listen 3839;
location / {
site_dir /srv/shiny-server/biserver;
log_dir /var/log/shiny-server;
}
}
1 回答
同样的问题在这里......解决了 .
shiny-server和rstudio服务器在安装目录中嵌入了pandoc .
只需删除闪亮服务器的坏pandoc二进制文件,并在同一位置执行逻辑链接到新的pandoc版本,或者在我的情况下,我使用了正在运行的本地rstudio服务器的pandoc版本 .