首页 文章

自定义sklearn管道变换器给出“pickle.PicklingError”

提问于
浏览
2

我正在尝试根据本教程的指导为Python sklearn管道创建自定义转换器:http://danielhnyk.cz/creating-your-own-estimator-scikit-learn/

现在我的自定义类/变换器看起来像这样:

class SelectBestPercFeats(BaseEstimator, TransformerMixin):
    def __init__(self, model=RandomForestRegressor(), percent=0.8,
                 random_state=52):
        self.model = model
        self.percent = percent
        self.random_state = random_state


    def fit(self, X, y, **fit_params):
        """
        Find features with best predictive power for the model, and
        have cumulative importance value less than self.percent
        """
        # Check parameters
        if not isinstance(self.percent, float):
            print("SelectBestPercFeats.percent is not a float, it should be...")
        elif not isinstance(self.random_state, int):
            print("SelectBestPercFeats.random_state is not a int, it should be...")

        # If checks are good proceed with fitting...
        else:
            try:
                self.model.fit(X, y)
            except:
                print("Error fitting model inside SelectBestPercFeats object")
                return self

            # Get feature importance
            try:
                feat_imp = list(self.model.feature_importances_)
                feat_imp_cum = pd.Series(feat_imp, index=X.columns) \
                    .sort_values(ascending=False).cumsum()

                # Get features whose cumulative importance is <= `percent`
                n_feats = len(feat_imp_cum[feat_imp_cum <= self.percent].index) + 1
                self.bestcolumns_ = list(feat_imp_cum.index)[:n_feats]
            except:
                print ("ERROR: SelectBestPercFeats can only be used with models with"\
                       " .feature_importances_ parameter")
        return self


    def transform(self, X, y=None, **fit_params):
        """
        Filter out only the important features (based on percent threshold)
        for the model supplied.

        :param X: Dataframe with features to be down selected
        """
        if self.bestcolumns_ is None:
            print("Must call fit function on SelectBestPercFeats object before transforming")
        else:
            return X[self.bestcolumns_]

我正在将此类集成到sklearn管道中,如下所示:

# Define feature selection and model pipeline components
rf_simp = RandomForestRegressor(criterion='mse', n_jobs=-1,
                                n_estimators=600)
bestfeat = SelectBestPercFeats(rf_simp, feat_perc)
rf = RandomForestRegressor(n_jobs=-1,
                           criterion='mse',
                           n_estimators=200,
                           max_features=0.4,
                           )

# Build Pipeline
master_model = Pipeline([('feat_sel', bestfeat), ('rf', rf)])

# define GridSearchCV parameter space to search, 
#   only listing one parameter to simplify troubleshooting
param_grid = {
    'feat_select__percent': [0.8],
}

# Fit pipeline model
grid = GridSearchCV(master_model, cv=3, n_jobs=-1,
                    param_grid=param_grid)

# Search grid using CV, and get the best estimator
grid.fit(X_train, y_train)

每当我运行最后一行代码( grid.fit(X_train, y_train) )时,我得到以下"PicklingError" . 任何人都可以在我的代码中看到导致此问题的原因吗?

编辑:

或者,我的Python设置中有什么东西是错的......我可能会错过一个包或类似的东西吗?我刚刚检查过我能成功 import pickle

回溯(最近一次调用最后一次):文件“”,第5行,在文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ model_selection_search.py”中,行945,在fit return self._fit(X,y,groups,ParameterGrid(self.param_grid))文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ model_selection_search .py“,第564行,在_fit中为parameter_iterable文件中的参数”C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ externals \ joblib \ parallel.py“,line 768,在调用self.retrieve()文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ externals \ joblib \ parallel.py”,第719行,检索在检索self._output.extend(作业)中引发异常文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ externals \ joblib \ parallel.py”,第682行.get(timeout = self.timeout))文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ multiprocessin g \ pool.py“,第608行,在get raise self._value文件中”C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ multiprocessing \ pool.py“,第385行,在_handle_tasks中(任务)文件“C:\ Users \ jjaaae \ AppData \ Local \ Programs \ Python \ Python36 \ lib \ site-packages \ sklearn \ externals \ joblib \ pool.py”,第371行,发送CustomizablePickler(缓冲区,自我 . _reducers).dump(obj)_pickle.PicklingError:无法pickle:内置函数上的属性查找SelectBestPercFeats失败

1 回答

  • 3

    pickle包需要在另一个模块中定义自定义类,然后导入 . 因此,创建另一个python包文件(例如 transformation.py ),然后像 from transformation import SelectBestPercFeats 一样导入它 . 这将解决酸洗错误 .

相关问题